mirror of
https://github.com/gentoo-mirror/gentoo.git
synced 2025-12-11 00:07:51 +03:00
152 lines
3.4 KiB
Bash
152 lines
3.4 KiB
Bash
# Copyright 1999-2025 Gentoo Authors
|
|
# Distributed under the terms of the GNU General Public License v2
|
|
|
|
EAPI=8
|
|
|
|
FORTRAN_NEEDED=fortran
|
|
DISTUTILS_EXT=1
|
|
DISTUTILS_USE_PEP517=meson-python
|
|
PYTHON_COMPAT=( pypy3 pypy3_11 python3_{10..13} )
|
|
PYTHON_REQ_USE="threads(+)"
|
|
|
|
inherit flag-o-matic fortran-2 distutils-r1
|
|
|
|
DESCRIPTION="Scientific algorithms library for Python"
|
|
HOMEPAGE="
|
|
https://scipy.org/
|
|
https://github.com/scipy/scipy/
|
|
https://pypi.org/project/scipy/
|
|
"
|
|
|
|
if [[ ${PV} == *9999* ]] ; then
|
|
inherit git-r3
|
|
|
|
# Need submodules, so git for now.
|
|
EGIT_REPO_URI="https://github.com/scipy/scipy"
|
|
EGIT_BRANCH="maintenance/$(ver_cut 1-2).x"
|
|
EGIT_SUBMODULES=( '*' )
|
|
else
|
|
inherit pypi
|
|
|
|
# Upstream is often behind with doc updates
|
|
DOC_PV=1.15.2
|
|
|
|
SRC_URI+="
|
|
doc? (
|
|
https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip
|
|
)"
|
|
|
|
if [[ ${PV} != *rc* ]] ; then
|
|
KEYWORDS="amd64 arm arm64 ~loong ~ppc ppc64 ~riscv ~s390 ~sparc x86"
|
|
fi
|
|
fi
|
|
|
|
LICENSE="BSD LGPL-2"
|
|
SLOT="0"
|
|
IUSE="doc +fortran test-rust"
|
|
|
|
# pythran is needed in both BDEPEND (for /usr/bin/pythran) and in DEPEND
|
|
# to actually compile code generated by pythran (headers and such needed).
|
|
#
|
|
# umfpack is technically optional but it's preferred to have it available.
|
|
DEPEND="
|
|
>=dev-python/numpy-1.23.5:=[lapack,${PYTHON_USEDEP}]
|
|
sci-libs/arpack:=
|
|
sci-libs/umfpack
|
|
virtual/cblas
|
|
>=virtual/lapack-3.8
|
|
"
|
|
RDEPEND="
|
|
${DEPEND}
|
|
dev-python/pillow[${PYTHON_USEDEP}]
|
|
"
|
|
DEPEND+="
|
|
fortran? (
|
|
>=dev-python/pythran-0.16.0[${PYTHON_USEDEP}]
|
|
)
|
|
"
|
|
BDEPEND="
|
|
dev-lang/swig
|
|
>=dev-python/cython-3.0.8[${PYTHON_USEDEP}]
|
|
>=dev-python/meson-python-0.15.0[${PYTHON_USEDEP}]
|
|
>=dev-python/pybind11-2.13.2[${PYTHON_USEDEP}]
|
|
>=dev-build/meson-1.1.0
|
|
!kernel_Darwin? ( dev-util/patchelf )
|
|
virtual/pkgconfig
|
|
doc? ( app-arch/unzip )
|
|
fortran? (
|
|
>=dev-python/pythran-0.16.0[${PYTHON_USEDEP}]
|
|
)
|
|
test? (
|
|
>=dev-python/hypothesis-6.30[${PYTHON_USEDEP}]
|
|
)
|
|
test-rust? (
|
|
dev-python/pooch[${PYTHON_USEDEP}]
|
|
)
|
|
"
|
|
|
|
EPYTEST_XDIST=1
|
|
distutils_enable_tests pytest
|
|
|
|
src_unpack() {
|
|
default
|
|
|
|
if use doc; then
|
|
unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die
|
|
fi
|
|
}
|
|
|
|
python_configure_all() {
|
|
DISTUTILS_ARGS=(
|
|
-Dblas=blas
|
|
-Dlapack=lapack
|
|
-Duse-pythran=$(usex fortran true false)
|
|
)
|
|
|
|
# https://bugs.gentoo.org/932721
|
|
has_version '>=dev-python/numpy-2.0.0' && filter-lto
|
|
}
|
|
|
|
python_test() {
|
|
cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
|
|
|
|
local EPYTEST_DESELECT=(
|
|
# Network
|
|
scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all
|
|
scipy/datasets/tests/test_data.py::TestDatasets::test_ascent
|
|
scipy/datasets/tests/test_data.py::TestDatasets::test_face
|
|
scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram
|
|
|
|
# Crashes with assertion, not a regression
|
|
# https://github.com/scipy/scipy/issues/19321
|
|
scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object
|
|
)
|
|
local EPYTEST_IGNORE=()
|
|
|
|
if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then
|
|
EPYTEST_IGNORE+=(
|
|
scipy/datasets/tests/test_data.py
|
|
)
|
|
fi
|
|
|
|
case ${EPYTHON} in
|
|
pypy3*)
|
|
EPYTEST_DESELECT+=(
|
|
# TODO
|
|
'scipy/special/tests/test_data.py::test_boost[<Data for expi: expinti_data_long_ipp-expinti_data_long>]'
|
|
)
|
|
;;
|
|
esac
|
|
|
|
local -x PYTEST_DISABLE_PLUGIN_AUTOLOAD=1
|
|
# avoid other stuff being multithreaded when using xdist
|
|
local -x PYTHON_CPU_COUNT=1
|
|
epytest scipy
|
|
}
|
|
|
|
python_install_all() {
|
|
use doc && local HTML_DOCS=( "${WORKDIR}"/html/. )
|
|
|
|
distutils-r1_python_install_all
|
|
}
|